Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTGCAATGCTGGCAGCTGTG
..(((((((((((((((((((&))))).)))..)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198999
GeneSymbolSLC26A5
Binding site589,613
Score0.846
Seed1
Au0.515
Energy-22.4
Binding len24
Me-4.957
Phylopstem0.606472696956522
Phylopflank1.0829517227500003
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure