Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTGGTCCGTGGGTTTACCACCGCAGCAGCT
..((.((((((((.(((((.(&.).))))).)))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_198999
GeneSymbolSLC26A5
Binding site912,946
Score0.923
Seed0
Au0.485
Energy-22.9
Binding len21
Me-9.933
Phylopstem1.7315385
Phylopflank2.919208845
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure