Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGACGACCTGCTGCTGCT
..(((((.((((((((..(((&)))..)))))).)).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199002
GeneSymbolARHGEF1
Binding site2079,2100
Score1.0
Seed0
Au0.309
Energy-23.7
Binding len21
Me-7.271
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure