Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCTCCGCCTACGGCTGCAAG
((((((((((((..((.(((.&))))).))))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199003
GeneSymbolTHAP1
Binding site241,264
Score0.846
Seed1
Au0.397
Energy-21.6
Binding len23
Me-6.084
Phylopstem1.3371812375
Phylopflank1.74918771875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure