Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCTGCGGCGGCAGA
((((.(((((((....(((((&)))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199003
GeneSymbolTHAP1
Binding site188,206
Score0.923
Seed0
Au0.397
Energy-19.8
Binding len18
Me-11.171
Phylopstem0.6283995714285714
Phylopflank1.6445839174999999
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end5
Position5UTR
2D Structure