Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCTGAATGTGGGCATTAATTTTTTGACTGCAGCTCTGCT
..((((((((((((((((((.&))))))......................))))))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199004
GeneSymbolARRB2
Binding site1453,1496
Score0.846
Seed1
Au0.441
Energy-19.1
Binding len43
Me-4.957
Phylopstem3.6633371666666674
Phylopflank4.23910309
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end7
Position3UTR
2D Structure