Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGTCCCAGAGCCGCAGCTGCT
..((((((((((((.(..((.&.)).).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199037
GeneSymbolSCN1B
Binding site217,241
Score0.846
Seed1
Au0.25
Energy-26.2
Binding len19
Me-5.692
Phylopstem3.0717549999999996
Phylopflank2.8636953575
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure