Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCATTGTGCCAGGG
.((((((..(((((((......&))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_199121
GeneSymbolVWA1
Binding site2412,2426
Score1.0
Seed1
Au0.338
Energy-19.5
Binding len14
Me-7.163
Phylopstem-0.2687639142857142
Phylopflank0.12561715125
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure