Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGCCGGGGGCTGCAAG
((((((((.((((((...(((&)))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199121
GeneSymbolVWA1
Binding site414,434
Score0.923
Seed1
Au0.25
Energy-23.4
Binding len20
Me-5.227
Phylopstem0.452525075
Phylopflank-0.058517967499999934
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure