Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCTGCAAAAGGAGCTGCAGG
((((((((.(..(((((.((.&)).)))))..).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199122
GeneSymbolTBRG4
Binding site1225,1246
Score0.846
Seed1
Au0.353
Energy-22.1
Binding len21
Me-11.166
Phylopstem-0.2697585625
Phylopflank-0.6406173825
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure