Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCACTTACGGGACTCACTCATAGACCTCCTCCAGCGTGGCTGCC
..((((((((.((((..((((&.))))....)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199123
GeneSymbolSETD3
Binding site1048,1092
Score1.0
Seed1
Au0.412
Energy-19.4
Binding len22
Me-8.015
Phylopstem3.9169483750000005
Phylopflank1.4030537667499998
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure