Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCAACGTCACGACAGTGGAGAGAAACATTGACCAGGCAGTGA
(((((.((.(((((((((((((&))))))))..............)))))...........)).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_199127
GeneSymbolGGTLC2
Binding site599,646
Score0.846
Seed0
Au0.412
Energy-20.3
Binding len47
Me-6.895
Phylopstem-0.0964672222222222
Phylopflank-0.02171244374999999
Longest consecutive pairings8
Position of longest consecutive pairings39
Pairings in 3prime end8
PositionCDS
2D Structure