Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CGACCGCGGCCGGGAG
((.(.((((((((((......&)))))))))).).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350823
GeneSymbolICA1
Binding site34,50
Score0.846
Seed0
Au0.279
Energy-19.9
Binding len16
Me-9.847
Phylopstem0.46543720000000005
Phylopflank0.8508985849999999
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end2
Position5UTR
2D Structure