Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACAACTGAGGACCAGCTGCT
..(((((((((((((((....&)))))))).....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199131
GeneSymbolVAX1
Binding site3617,3638
Score0.923
Seed1
Au0.574
Energy-20.8
Binding len21
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end4
Position3UTR
2D Structure