Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TACCAGGAAAGGATGAAAATGGAAAAGGCTGCTAAGTGG
(((((((((((((((.((((..&)))).)))))))).................)))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_199136
GeneSymbolFAM221A
Binding site836,875
Score0.897
Seed1
Au0.559
Energy-20.3
Binding len39
Me-4.171
Phylopstem-0.0915565515151515
Phylopflank-0.022112649999999998
Longest consecutive pairings8
Position of longest consecutive pairings26
Pairings in 3prime end5
PositionCDS
2D Structure