Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCCGAGCCGCCGTCGGGGAAGATTAATAAAGCTGCC
..((((((((((((....(((&)))....))))))...................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199138
GeneSymbolAMER2
Binding site517,556
Score0.846
Seed1
Au0.485
Energy-20.2
Binding len39
Me-5.925
Phylopstem1.0934970258064516
Phylopflank0.7507977487499999
Longest consecutive pairings6
Position of longest consecutive pairings26
Pairings in 3prime end4
PositionCDS
2D Structure