Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCGCCGCCGCCTCTGCAGT
((((((..(((((.((((((.&)))).)).)))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199166
GeneSymbolALAS1
Binding site140,162
Score0.846
Seed0
Au0.338
Energy-22.1
Binding len22
Me-8.652
Phylopstem-0.26709571428571427
Phylopflank0.22596654624999996
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure