Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGAAAATAACTGCATGAGAATTTATACAACCTGCCAACCTAGCTGG
...((((((.(((((..((((&.))))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199167
GeneSymbolCLUL1
Binding site428,478
Score0.923
Seed0
Au0.603
Energy-20.8
Binding len19
Me-7.99
Phylopstem-1.0385321666666667
Phylopflank-0.5689377775
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure