Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGAAATCCTGAAATAAAAAAGGATAATGCAATAAACACAGTTGCAGG
(((((((((.(((((((....&.))))))...).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199167
GeneSymbolCLUL1
Binding site1526,1577
Score0.846
Seed1
Au0.721
Energy-16.6
Binding len22
Me-5.18
Phylopstem4.586492666666667
Phylopflank4.301655638624999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure