Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGAAGCCTATGTATGCCATGGA
.(((((((((((..........&.))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_199168
GeneSymbolCXCL12
Binding site1344,1368
Score0.846
Seed1
Au0.544
Energy-16.5
Binding len14
Me-6.908
Phylopstem1.3934862833333332
Phylopflank0.8953381050000002
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end0
Position3UTR
2D Structure