Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGTGAGATCCGTCTTTGGCCTCCTCCAGAATGGAGCTGGC
..((((((((.(((((((....&.))))))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_199168
GeneSymbolCXCL12
Binding site1184,1226
Score0.923
Seed1
Au0.397
Energy-23.9
Binding len18
Me-7.782
Phylopstem2.15698495
Phylopflank2.19984441
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure