Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGTCAGCCGCATTGCC
..((((.((((((((...((.&))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199168
GeneSymbolCXCL12
Binding site16,33
Score0.846
Seed0
Au0.258
Energy-19.5
Binding len17
Me-6.734
Phylopstem1.244244225
Phylopflank1.584944390125
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure