Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCCCGCAGCAGCGC
.(((.(((((((..((.....&))..))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199168
GeneSymbolCXCL12
Binding site851,867
Score0.923
Seed0
Au0.368
Energy-19.1
Binding len16
Me-10.058
Phylopstem1.8337592857142855
Phylopflank1.262190126875
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end2
Position3UTR
2D Structure