Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCAGGGAGGTGCCTAGCTTGGTGA
(((((((.(((((((.((((((&))))))))))))).)))......)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_199170
GeneSymbolPMEPA1
Binding site3178,3206
Score0.969
Seed1
Au0.471
Energy-25.2
Binding len28
Me-6.484
Phylopstem2.999364857142857
Phylopflank2.8575782499999995
Longest consecutive pairings13
Position of longest consecutive pairings15
Pairings in 3prime end7
Position3UTR
2D Structure