Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCAGGGAGGTGCCTAGCTTGGTGA
(((((((.(((((((.((((((&))))))))))))).)))......)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_199171
GeneSymbolPMEPA1
Binding site3216,3244
Score0.923
Seed1
Au0.471
Energy-25.2
Binding len28
Me-6.484
Phylopstem2.3457838571428566
Phylopflank3.4313057000000002
Longest consecutive pairings13
Position of longest consecutive pairings15
Pairings in 3prime end7
Position3UTR
2D Structure