Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTACGAAGGTGGCAGCTGACAGA
((((((((((.((((((((((&)))))))))...).))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199171
GeneSymbolPMEPA1
Binding site2814,2840
Score0.846
Seed1
Au0.441
Energy-22.7
Binding len26
Me-6.762
Phylopstem0.2812049538461539
Phylopflank-0.1558101475
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end8
Position3UTR
2D Structure