Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACAGCTGCAGCTATCAAG
(((.(((((((((((((....&)))))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199177
GeneSymbolMRRF
Binding site546,565
Score0.846
Seed0
Au0.544
Energy-21.8
Binding len19
Me-6.97
Phylopstem0.3672466461538461
Phylopflank0.09384326499999998
Longest consecutive pairings13
Position of longest consecutive pairings6
Pairings in 3prime end4
PositionCDS
2D Structure