Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCACAGGAGGAGCTGGCGGCCGCCAAGCTGCAGA
((((((((((((((((..(((&.))).))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199181
GeneSymbolSOGA1
Binding site1313,1351
Score0.923
Seed1
Au0.368
Energy-26.5
Binding len24
Me-3.938
Phylopstem0.6811233333333332
Phylopflank1.5739974424999996
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure