Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCACATACAGCCGCTTCCTGGAAG
((.(((..(((((((((.(((&)).).)))))))))...))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199191
GeneSymbolBABAM2
Binding site1344,1368
Score0.846
Seed0
Au0.426
Energy-18.5
Binding len24
Me-9.352
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure