Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCCAACAGCTGCGGC
(((((((((..(..(((((((&))))))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350849
GeneSymbolUCHL5
Binding site3354,3374
Score1.0
Seed1
Au0.588
Energy-22.4
Binding len20
Me-10.151
Phylopstem0.07216015555555558
Phylopflank0.12279347875000005
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure