Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCGGAAAGGAAGCTC
....(((((((((((((.....&)))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_199203
GeneSymbolPEDS1-UBE2V1
Binding site1307,1322
Score0.846
Seed0
Au0.618
Energy-19.8
Binding len15
Me-9.547
Phylopstem0.43651645714285714
Phylopflank-0.812814415
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end3
Position3UTR
2D Structure