Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGGAGGTGTAGAGATGAAGCAATTGCAGCTTGCAGA
((((((((((((((((.....&.)))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199227
GeneSymbolMETAP1D
Binding site644,683
Score1.0
Seed1
Au0.485
Energy-23.0
Binding len19
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end3
PositionCDS
2D Structure