Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCGAAAGCAGCTAGGCC
..((((((((..(((.(((((&))))))))..))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199229
GeneSymbolRPE
Binding site190,211
Score0.846
Seed1
Au0.485
Energy-19.0
Binding len21
Me-11.362
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end7
PositionCDS
2D Structure