Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGACTTGGGAGGAGAAGAGTATCGGTGC
(((((((((((((((((((((.&))))))))).....)))))).......)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_199245
GeneSymbolVAMP1
Binding site1245,1279
Score1.0
Seed1
Au0.456
Energy-26.6
Binding len34
Me-3.938
Phylopstem0.45781632727272725
Phylopflank0.49223810999999995
Longest consecutive pairings9
Position of longest consecutive pairings25
Pairings in 3prime end7
Position3UTR
2D Structure