Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGCACAAGTGGAGGAGGTGGTGG
(((((.(((((((((((((...&)))))))........)))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_199245
GeneSymbolVAMP1
Binding site254,282
Score0.923
Seed0
Au0.456
Energy-24.9
Binding len28
Me-5.839
Phylopstem1.0157210714285714
Phylopflank0.16967145125000005
Longest consecutive pairings7
Position of longest consecutive pairings21
Pairings in 3prime end5
PositionCDS
2D Structure