Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&AGCTAGGGAGGGGCTGGG
..(((((((((((((((.(...&).))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_199245
GeneSymbolVAMP1
Binding site1315,1333
Score1.0
Seed1
Au0.397
Energy-23.9
Binding len18
Me-4.957
Phylopstem-0.04778716
Phylopflank0.49099644000000003
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure