Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCTGGAGAGGGAGGACTTAGGGAGAGATCACTTCTAGCTGGTA
.((((((((((((((((((...&))))))))))).........................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001350853
GeneSymbolFTCDNL1
Binding site1216,1260
Score0.846
Seed1
Au0.559
Energy-20.7
Binding len44
Me-3.793
Phylopstem0.7925258604651163
Phylopflank0.6909023000000001
Longest consecutive pairings11
Position of longest consecutive pairings33
Pairings in 3prime end5
Position3UTR
2D Structure