Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGGCAGGAGCAT
.(((..((((..(((((((((&)))))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199245
GeneSymbolVAMP1
Binding site356,375
Score0.923
Seed0
Au0.456
Energy-20.8
Binding len19
Me-15.985
Phylopstem0.6191203222222222
Phylopflank0.75006272125
Longest consecutive pairings13
Position of longest consecutive pairings6
Pairings in 3prime end8
PositionCDS
2D Structure