Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCGAGGCCTCCACCCGGGGAGGGTGGTTACCGCTGAGGAGCTGCAGTC
.((((((((((((((((((.((&.)).)))))))................)))))))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_199246
GeneSymbolCCNG1
Binding site50,101
Score0.846
Seed1
Au0.426
Energy-22.4
Binding len41
Me-3.793
Phylopstem1.8154043277777774
Phylopflank1.4662627975000004
Longest consecutive pairings7
Position of longest consecutive pairings30
Pairings in 3prime end7
Position5UTR
2D Structure