Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTGCAGTCTGCAGCCGCGT
.(((.(((((((((((((((.&))).))))).))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199262
GeneSymbolSP6
Binding site1044,1066
Score0.846
Seed0
Au0.353
Energy-22.8
Binding len22
Me-7.912
Phylopstem2.856894176470588
Phylopflank3.5015347198749995
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure