Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCCCAGCAGCAGTT
..((.(((((((..(((((((&))))))))).))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199263
GeneSymbolTHSD1
Binding site1655,1674
Score0.923
Seed0
Au0.471
Energy-19.4
Binding len19
Me-11.222
Phylopstem-1.1807314285714285
Phylopflank-0.05189567249999998
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure