Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAACTCCAAGAACTCAGGGATTTACGCTGCTGCCGTGGCTGTG
..(((((((((((.(((..((&.))..))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199280
GeneSymbolTOGARAM2
Binding site2914,2961
Score0.923
Seed1
Au0.441
Energy-22.8
Binding len21
Me-5.814
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure