Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCGGCAGCAGCAGCTGCAC
.(((((((((.(((((.....&.))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199287
GeneSymbolCCDC137
Binding site827,849
Score0.846
Seed1
Au0.338
Energy-24.6
Binding len17
Me-6.618
Phylopstem0.26003252222222223
Phylopflank-0.147371070625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure