Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTCACTGCCCAGAAGCAGGGTTTTCCACGCAGACTGTAGCTGCT
..((((((((((((((..((.&.))..)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199289
GeneSymbolNEK5
Binding site2039,2085
Score0.846
Seed1
Au0.412
Energy-23.1
Binding len21
Me-4.957
Phylopstem-0.07205204666666676
Phylopflank-0.19799807700000002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure