Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAGATCCAAGATTTATCTCAGCAAGCACAACTAGCAGCTGCGGA
((((((((((((((((.....&.)))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199290
GeneSymbolNACA2
Binding site414,461
Score1.0
Seed1
Au0.529
Energy-24.1
Binding len19
Me-3.938
Phylopstem-0.20107486470588234
Phylopflank-0.20929647150000008
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure