Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCGACCCTGAGGCTGCGGC
((((((((..(((((.(((((&))))))))))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199293
GeneSymbolTH
Binding site1340,1363
Score0.923
Seed1
Au0.338
Energy-23.1
Binding len23
Me-6.47
Phylopstem2.3826765874999998
Phylopflank2.30137772375
Longest consecutive pairings10
Position of longest consecutive pairings13
Pairings in 3prime end7
PositionCDS
2D Structure