Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTAGGTAACTGCAGAAATAGCAAA
((((..(((((((((((((((&))))))..))))))))).....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350862
GeneSymbolSNX13
Binding site4044,4071
Score0.846
Seed0
Au0.691
Energy-20.5
Binding len27
Me-9.958
Phylopstem5.489872941176471
Phylopflank5.828023561249999
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end8
Position3UTR
2D Structure