Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTAGAAATCGCTGGGCTGTT
..((((((((((((.((((((&))))))..))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199328
GeneSymbolCLDN8
Binding site184,207
Score0.846
Seed1
Au0.485
Energy-21.4
Binding len23
Me-5.692
Phylopstem0.9448095785714286
Phylopflank0.8480177700000001
Longest consecutive pairings6
Position of longest consecutive pairings17
Pairings in 3prime end7
PositionCDS
2D Structure