Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATTGGTTGGGTCGGGG
.((((((...((((((((....&)))))))).....)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_199334
GeneSymbolTHRA
Binding site2749,2769
Score0.846
Seed1
Au0.382
Energy-19.5
Binding len20
Me-8.406
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end4
Position3UTR
2D Structure