Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGGGCGACTCAGGAGTGCCACGCACCTGCTCTAGAGCGGCAGCTGTC
..((((((((.(((.((((((&.))))....)).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199334
GeneSymbolTHRA
Binding site4014,4064
Score0.846
Seed1
Au0.353
Energy-22.9
Binding len25
Me-8.517
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure